Latex Jupiter Notebook

Latex Jupiter Notebook

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I have a python project in jupyter notebook, and I want to display the final output with latex.
I want this to be formatted using latex:
I read a bunch of forums but the fraction wasn't working for 2digit numbers
Any suggestions would be very helpful :)
You can directly display it as Latex using Latex . To keep the curly brackets as literals for Latex you need to use double {{ }} . Otherwise the \frac does not obtain the full operands.
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Jupyter is a free, open-source, interactive tool known as a
computational notebook, which researchers can use to combine software
code, computational output, explanatory text and multimedia resources
in a single document.

To give you a sense of its impact, Jupyter was awarded the 2017 ACM
Software Systems Award--a prestigious honor it shares with Java,
Unix, and the Web.

"One analysis of the code-sharing site GitHub counted more than 2.5
million public Jupyter notebooks in September 2018, up from 200,000 or
so in 2015."

www.nature.com

Publishing Jupyter Notebooks in LaTeX

Using the nbconvert command with Jupyter provides an easy way
of converting the notebook to a variety of formats, most notably HTML
and LaTeX.

Under the hood, nbconvert uses Jinja templates to specify how the
notebooks should be formatted. These templates can be fully
customized, allowing one to use nbconvert to create notebook
conversions in
different formats and styles.

Once we've decided which elements to print in the book and which to
leave out, we can develop a template that will provide the desired
results.

After running nbconvert we now have a LaTeX file, but for it to
be publication ready, we
need to format it nicely. This involves determining what
fonts/colors/design is
desirable, supplying the appropriate LaTeX code and finally running pdflatex to build the book.

Sample Notebook to Published Book

Click on image below to see `Look Inside' of book.

"The Jupyter Notebook can combine narrative, code, and graphics -- the
ideal combination for teaching anything programming related.
That's
why Andreas Müller chose to write his book, Introduction to Machine
Learning with Python , in a Jupyter notebook."

Notebook to Publication Ready PDF

Click on the image below to see
sample pages from a Jupyter Notebook by Tirthajyoti Sarkar, PhD.,
translated with nbconvert to LaTeX, with the resulting .tex file
reformatted by
TeXnology, using the Tufte Handout document style.
See Tirthajyoti's Notebook on GitHub at

Set_Algebra_With_Python.ipynb

Tutorials



Jupyter Notebook:

    Article -- Introduction to The Jupyter
Notebook by the Jupyter Team



Video -- Jupyter Notebook Tutorial, from Fullstack Academy



Article -- Jupyter Notebook The Definitive Guide, by
Datacamp



Article -- Jupyter Notebook for Beginners: A Tutorial



Markdown:



Easy, interactive, markdown tutorial

    Good quick reference

Within Markdown cells, you can include mathematics in a
straightforward way, using standard LaTeX notation: $...$ for inline
mathematics and $$...$$ for displayed mathematics.

The markup is passed to HTML using MathJaX, and to LaTeX in its native
form.
Importantly --
Markdown coding allows the document to be translated to
both HTML and
LaTeX for distribution of your document both on-line and in print.



JupyterLab -- The Next Generation Jupyter Web Interface:



Video description of features in the new interface for Jupiter
Notebooks

New Developments



JupyterLab


From Project Jupyter: JupyterLab is ready for users

Drag-and-drop to reorder notebook cells and copy them between notebooks.

Run code blocks interactively from text files (.py, .R, .md, .tex, etc.).

Link a code console to a notebook kernel to explore code
interactively without cluttering up the notebook with temporary
scratch work.

Edit popular file formats with live preview, such as Markdown,
JSON, CSV, and more.



Jupyter and Galaxy integration:



PLOS Computational Biology:
Easing entry barriers into complex
data analyses for    biomedical
researchers.



Nature blog: Jupyter joins the Galaxy



Jupyter and Gene Pattern integration:


Video describing Gene Pattern working with Jupyter

We can convert your Jupyter Notebook to publishable PDF.

Can we help in other ways as well?

Please get in touch to discuss your project!

Amy Hendrickson
amyh@texnology.com
617 738-8029

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Asked
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I'm working on my thesis using LaTeX (via overleaf.com). I have a number of Jupyter Notebooks (formerly IPython Notebook) that I would like to include as appendices. I've tried 2 approaches:
1) Using nbconvert to convert the notebook to LaTeX and putting it into my project using \include{} .
2) Using nbconvert to make pdfs and include them with pdfpages .
Option 1 is problematic because the tex output has lots of preamble statements (like \usepackage ) that I need to move in order to get to document to build. Option 2 is difficult because I can't figure out how to get the included pdf pages to be numbered correctly or to show up in the table of contents.
Essentially, I'm just wondering if anyone out there has figured out a good way (or even a not-so-good way that at least works) to include Jupyter notebooks as pages in large LaTeX documents.
Jupyter Notebook is a "a web application that allows you to create and share documents that contain live code, equations, visualizations and explanatory text." In my case, I'm using it to provide demonstrations of Python code for optical remote sensing so there's Python code, explanatory text, and outputs (tables, images, plots, etc.).
Jupyter has built in functionality that, as I understand it, uses pandoc to convert it's normal html output into LaTeX. However, it seems there are some limitations in that process that are preventing me from generating LaTeX that is suitable for my purpose. I'm relatively new to using LaTeX so I'm having trouble even coming up with a sensible way to approach the problem.
For Option 2, does it do what you want if you use something like this?
Here is how I like to include Jupyter notebooks in a LaTeX document with \include{} .
Your LaTeX can reference whatever you like in the overall LaTeX document.
This code creates test.md which is the intermediate file.
This will create test.tex which can then be inserted into your main LaTeX document with \include{test.tex} .
Note: The listings package must be available to your LaTeX installation. Dropping the --listings option works, but produces Tex which includes additional command sequences you may not want in your main Tex file. Add the standalone option -s to preview the pdf or to see which command sequences and packages you might want to include in your main Latex document:
You can then open the pdf test.pdf for a preview.
Take a look at Authorea ( http://www.authorea.com ) - it's similar to Overleaf, but offers a few more advanced features, including easy integration of ipython notebooks. See https://www.authorea.com/users/9932/articles/11070 for more info
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